Wintery Knight

…integrating Christian faith and knowledge in the public square

Stephen C. Meyer and Peter Atkins debate intelligent design

This dialog occurred in 2010 on the Unbelievable radio show.

I made a rough transcript, so please see below for that.

The MP3 file is here. (60 minutes)

Details:

The documentary film “Expelled” is presented by US Actor Ben Stein and makes the case that scientists who question Darwinian orthodoxy and support Intelligent Design are being “expelled” from academia.

As the UK edition of the DVD is released we ask “Is freedom of thought at stake or is Intelligent Design out of bounds when it comes to biological science?”

Stephen C Meyer is co founder of the Discovery Institute in the USA and a major proponent of Intelligent Design.

Peter Atkins is Professor of Chemistry at Oxford University and an outspoken atheist.

They both feature in “Expelled” and join Justin to debate the pros and cons of Intelligent Design theory.

Mark Haville who is bringing the film to the UK also joins the discussion.

Note: The transcript below is quite snarky and may include paraphrases of Dr. Atkins for the sake of humor.

My rough transcript of the Meyer-Atkins debate

Stephen Meyer:
– started researching on ID while doing his PhD at Cambridge
– the question is whether the information-bearing properties in DNA require a designer
– what cause is adequate to explain the digital code that in the simplest living cell
– alternative explanations like self-organization and RNA-first have failed
– so the best explanation for functional sequences of parts is an intelligent designer
– Darwinists have responded to this argument with insults and suppression of dissent

Peter Atkins:
– intelligent design is creationism
– there is no science at all in it
– information can emerge without an intelligent designer
– structures emerge spontaneously, no agent is needed to generate the structure
– information in DNA is also a structure

Stephen Meyer:
– structure and information are two different things
– many structures emerge spontaneously
– structure may be like the vortex that occurs when water goes down a drain

Peter Atkins:
– the vortex is information

Stephen Meyer:
– structures are different from functionally-specified digital information
– in DNA, there is a 4-digit alphabet that is used to create code sequences
– the thing to be explained is where do the functional sequences come from

Peter Atkins:
– information can grow without an agent
– the second law of thermodynamics
– the universe is falling into disorder
– but there are local abatements of chaos that create information
– evolution can cause the amount of information to grow

Stephen Meyer:
– that’s just an assertion
– I agree that energy flow through a system can produce spontaneous order
– but spontaneous order is not the same thing as information

Peter Atkins:
– spontaneous order is the same as information

Stephen Meyer:
– it’s not order that needs to be explained it’s specified complexity

Peter Atkins:
– what do you mean by specified complexity?

Stephen Meyer:
– the chemical bonds that connect to each letter do not determine the letter
– the chemical bonding sites will accept any letter as easily as any other
– any one of the 4 bases (letters) can attach at any place along the backbone

Peter Atkins:
– the selection of which letter comes next is determined by evolution

Stephen Meyer:
– that is just an assertion
– there is no physical process that sequences the letters to have a function

Peter Atkins:
– do you believe in evolution? YES OR NO!

Mark Haville:
– for him to answer the question you have to define the word
– do you mean macro or micro? biological or stellar? directed or undirected?

Peter Atkins:
– undirected molecules to man evolution by natural processes

Stephen Meyer:
– but even Dawkins doesn’t believe in evolution then
– you’re including the origin of life from non-living matter in evolution
– Dawkins says that there is no known naturalistic explanation for that

Mark Haville:
– you need to define your terms

[They discuss of the movie Expelled and the case of Richard Sternberg]

Stephen Meyer:
– the problem is people don’t want to talk about the science
– they denounce dissent as unscientific
– they will not debate about whther natural causes can explain the information
– I want to talk about the science

Peter Atkins:
– ID people raise interesting questions for naturalists to work on
– but you want to tell us what the answer is (intelligence) before we begin
– you start from the idea that an intelligence was involved

Justin Brierley:
– but you start with the idea that natural mechanisms can explain everything!

Stephen Meyer:
– for Dr. Atkins, only explanations based on material processes are valid

Peter Atkins:
– that is correct

Stephen Meyer:
– but we think that the activities of mind can explain some effects
– e.g. – the best explanation of the Rosetta stone is a mind

Peter Atkins:
– but we naturalists think of minds as material as well

Stephen Meyer:
– that’s a materialist pre-supposition on your part
– we would have to have a debate about mind and body

Mark Haville:
– I think that the materialist position is socially dangerous
– the problem with naturalism is that it is an ideology
– the ideology pushes absurdities, e.g. – the universe came from nothing uncaused
– and naturalists exert power over others to force them to believe nonsense

Stephen Meyer:
– science progresses as the result of scientists disagreeing
– both sides agree to the facts
– the debate is about the interpretation of those facts
– and one side is being ruled out a priori based on the pre-supposition of materialism

Peter Atkins:
– why do you say that an intelligence is involved in DNA but not general relativity

Stephen Meyer:
– it is always logically possible that intelligence can be invlved in any effect
– the main thing is that explanations based on intelligence should not be ruled out

Peter Atkins:
= well you can’t appeal to any non-material process in expaining anything
– those are the rules

Moderator:
– what does intelligent design have to do with religion?

Stephen Meyer:
– creationism is about understanding the istory of life using the Bible
– intelligent design is about using the same method of inquiry as Darwin
– we know that information arises from intelligent causes
– humans create information all the time by using intelligence to sequence parts

Moderator:
– are intelligent design proponents disreputable?

Stephen Meyer:
– what’s disreputable is shutting down debate by setting arbitrary rules

Peter Atkins:
– we are both interested in the same questions

Moderator:
– why won’t you let Stephen publish his papers then?

Peter Atkins:
– because it breaks the pre-suppositions of naturalism and materialism

Stephen Meyer:
– you’re shutting down inquiry by using an arbitrary definition of science

Mark Haville:
– we need to define the word science
– science should be based on what we can observe empirically
– we can observe micro-evolution empirically
– but Darwinism goes beyond what is observable to postulate macro-evolution

Peter Atkins:
– but paleobiology is replete with evidence

Stephen Meyer:
– paleobiology uses a method of inference that I think is valid
– but intelligent design uses the same mode of reasoning which is also valid

Peter Atkins:
= you’re intellectually lazy
– we’re smart, we’re using our brains

Moderator:
– you’re saying that appeals to intelligent causes ends science?
– is ID the view that some things are too complex to be explained with naturalism?

Peter Atkins:
– yes, and to teach children that materialism is false is child abuse

Stephen Meyer:
– let’s drop the insults and the rhetoric and focus on the arguments
– the ID argument is not based on what we don’t know, it’s based on what we DO know
– first, we can ask what undirected natural processes can and cannot do
– second, we can ask what we know about intelligent causes from our own experience
– what we do know seems to me to require an intelligent agent as a cause

Peter Atkins:
– GOD! Do you mean God!? Do you mean God!?

Stephen Meyer:
– I personally mean God, but all that the arguments proves is a generic intelligent cause
– and I am using the same method of investigation that Darwin used to get there
– what we know from our experience is that a mind is needed to create information

Peter Atkins:
– NONSENSE! ABSOLUTE NONSENSE!

Stephen Meyer:
– in my book, I list 10 predictions made by ID, so it’s not a science-stopper
– furthermore, the enterprise of science began with th goal of understanding God
– consider the earliest scientists, people like James Boyler and Johannes Kepler

Peter Atkins:
– that was 300 years ago, we’ve moved on

Mark Haville:
– what about Max Planck then?

Stephen Meyer:
– how about James Clark Maxwell?

Mark Haville:
– we need to focus on the facts

Peter Atkins:
– what do you mean by the facts?

Mark Haville:
– well the fact is that Darwinism has no mechanism to produce new information

Peter Atkins:
– well copying errors introduces beneficial mutations

Stephen Meyer:
– let’s focus on where we get the first information from the simplest organism
– you can’t account for the first organism by appealing to copying errors
– to add functionality to a program, you need new lines codes from an intelligence
– once you have life, you can generate some new information
– but you can’t generate macro-evolution either

Peter Atkins:
– if we give you your explanation for teh origin of life, will you give this up

Stephen Meyer:
– of course! I’m a former theistic evolutionist
– but right now the evidence is not there for it
– we have to decide these questions based on what we see with our own eyes today

Peter Atkins:
– but I pre-suppose materialism as the starting point of all explanations
– you’re just intellectually lazy to abandon my pre-supposition

Stephen Meyer:
– why is it is less intellectually lazy to insist that materialism is true
– we are making plenty of predictions, and isn’t that what science is about?
– consider Junk DNA – you guys said it had no use
– now we know it has a use

Peter Atkins:
– naturalists were open to the idea that junk DNA might have a use before ID

Moderator:
– Dr. Meyer, what about the wall that locks out intelligence as an explanation?

Stephen Meyer:
– if these are interesting questions, then we should allow freedom of inquiry
– that’s how science advances

Peter Atkins:
– for all their science-talk really they are just saying God did it
– people who don’t agree with me are not using their brains, like I do
– to give up on my pre-supposition of materialism is a denial of humanity

Mark Haville:
– there are important issues that are affected by our view of origins
– everyone who hasn’t seen Expelled movie should definitely see it

Filed under: News, , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , ,

Four ways that the progress of experimental science conflicts with atheism

When people ask me whether the progress of science is more compatible with theism or atheism, I offer the following four basic pieces of scientific evidence that are more compatible with theism than atheism.

Here are the four pieces of evidence best explained by a Creator/Designer:

  1. the kalam argument from the origin of the universe
  2. the cosmic fine-tuning (habitability) argument
  3. the biological information in the first replicator (origin of life)
  4. the sudden origin of all of the different body plans in the fossil record (Cambrian explosion)

And I point to specific examples of recent discoveries that confirm those four arguments. Here are just a few of them:

  1. An explanation of 3 of the 6 experimental evidences for the Big Bang cosmology (From an article from Caltech)
  2. Examples of cosmic fine-tuning to allow the existence of conscious, embodied life (From the New Scientist)
  3. Evidence that functional protein sequences are beyond the reach of chance, (from Doug Axe’s JMB article)
  4. Evidence showing that Ediacaran fauna are not precursors to the Cambrian fossils, (from the journal Nature)

Atheists will typically reply to the recent scientific discoveries that overturned their speculations like this:

  1. Maybe the Big Bang cosmology will be overturned by the Big Crunch/Bounce so that the universe is eternal and has no cause
  2. Maybe there is a multiverse: an infinite number of unobservable, untestable universes which makes our finely-tuned one more probable
  3. Maybe the origin of life could be the result of chance and natural processes
  4. Maybe we will find a seamless chain of fossils that explain how the Cambrian explosion occurred slowly, over a long period time

Ever heard any of these responses?

Below I list some resources to help you to respond to the four responses of atheists to the experimental data.

1) The Big Crunch/Bounce has been disproved theoretically and experimentally.

Theoretically:

Nature 302, 505 – 506 (07 April 1983); doi:10.1038/302505a0

The impossibility of a bouncing universe

ALAN H. GUTH* & MARC SHER†

*Center for Theoretical Physics, Laboratory for Nuclear Science and Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA

†Department of Physics, University of California, Irvine, California 92717, USA

Petrosian1 has recently discussed the possibility that the restoration of symmetry at grand unification in a closed contracting Robertson–Walker universe could slow down and halt the contraction, causing the universe to bounce. He then went on to discuss the possibility that our universe has undergone a series of such bounces. We disagree with this analysis. One of us (M.S.) has already shown2 that if a contracting universe is dominated by radiation, then a bounce is impossible. We will show here two further results: (1) entropy considerations imply that the quantity S (defined in ref. 1 and below), which must decrease by ~1075 to allow the present Universe to bounce, can in fact decrease by no more than a factor of ~2; (2) if the true vacuum state has zero energy density, then a universe which is contracting in its low temperature phase can never complete a phase transition soon enough to cause a bounce.

Experimentally:

The universe is not only expanding, but that expansion appears to be speeding up. And as if that discovery alone weren’t strange enough, it implies that most of the energy in the cosmos is contained in empty space — a concept that Albert Einstein considered but discarded as his “biggest blunder.” The new findings have been recognized as 1998’s top scientific breakthrough by Science magazine.

[...]The flood of findings about the universe’s expansion rate is the result of about 10 years of study, said Saul Perlmutter, team leader of the Supernova Cosmology Project at Lawrence Berkeley National Laboratory.

Perlmutter and others found such a yardstick in a particular kind of exploding star known as a Type 1A supernova. Over the course of several years, the astronomers developed a model to predict how bright such a supernova would appear at any given distance. Astronomers recorded dozens of Type 1A supernovae and anxiously matched them up with redshifts to find out how much the universe’s expansion was slowing down.

To their surprise, the redshift readings indicated that the expansion rate for distant supernovae was lower than the expansion rate for closer supernovae, Perlmutter said. On the largest scale imaginable, the universe’s galaxies appear to be flying away from each other faster and faster as time goes on.

“What we have found is that there is a ‘dark force’ that permeates the universe and that has overcome the force of gravity,” said Nicholas Suntzeff of the Cerro Tololo Inter-American Observatory, who is the co-founder of another group called the High-z Supernova Search Team. “This result is so strange and unexpected that it perhaps is only believable because two independent international groups have found the same effect in their data.”

There has only been one creation of the universe, and the universe will never reverse its expansion, so that it could oscillate eternally. That view is popular, perhaps in part because many people watched videos of Carl Sagan speculating about it in public school classrooms, but all it was was idle naturalistic speculation, (Sagan was a naturalist, and held out hope that science would vindicate naturalism), and has been contradicted by good experimental science. You should be familiar with the 3 evidences for the Big Bang (redshift, light element abundances (helium/hydrogen) and the cosmic microwave background radiation. There are others, (radioactive element abundances, second law of thermodynamics, stellar lifecycle), but those are the big three. Point out how the experimental evidence for the Big Bang has piled up, making the problem even worse for the eternal-universe naturalists.

2) The multiverse has not been tested experimentally, it’s pure speculation.

Speculation:

Multiverse thinking or the belief in the existence of parallel universes is more philosophy or science fiction than science. ”Cosmology must seem odd to scientists in other fields”.

George Ellis, a well-known mathematician and cosmologist, who for instance has written a book with Stephen Hawking, is sceptical of the idea that our universe is just another universe among many others.

A few weeks ago, Ellis, professor emeritus of applied mathematics at the University of Cape Town, reviewed Brian Greene’s book The Hidden Reality: Parallel Universes and the Deep Laws of the Cosmos (Knopf/Allen Lane, 2011) in the journal Nature. He is not at all convinced that the multiverse hypothesis is credible: ”Greene is not presenting aspects of a known reality; he is telling of unproven theoretical possibilities.”

According to professor Ellis, there is no evidence of multiverses, they cannot be tested and they are not science.

Ellis is not the only multiverse sceptic in this universe. A few months ago, science writer John Horgan wrote a column in Scientific American, expressing his doubt in multiverses.

When you get into a debate, you must never ever let the other side get away with asserting something they have no evidence for. Call them on it – point out that they have no evidence, and then hammer them with evidence for your point. Pile up cases of fine-tuning on top of each other and continuously point out that they have no experimental evidence for their speculations. Point out that more evidence we get, the more cases of fine-tuning we find, and the tougher the problem gets for naturalists. There is no evidence for a multiverse, but there is evidence for fine-tuning. TONS OF IT.

3) Naturalistic theories for the origin of life have two problems: can’t make the amino acids in an oxydized atmosphere and can’t make protein and DNA sequences by chance in the time available.

Building blocks:

The oxidation state of Hadean magmas and implications for early Earth’s atmosphere

Dustin Trail, E. Bruce Watson & Nicholas D. Tailby

Nature 480, 79–82 (01 December 2011) doi:10.1038/nature10655

[...]These results suggest that outgassing of Earth’s interior later than ~200?Myr into the history of Solar System formation would not have resulted in a reducing atmosphere.

Functional protein sequences:

J Mol Biol. 2004 Aug 27;341(5):1295-315.

Estimating the prevalence of protein sequences adopting functional enzyme folds.

Axe DD.

The Babraham Institute, Structural Biology Unit, Babraham Research Campus, Cambridge CB2 4AT, UK. doug.axe@bbsrc.ac.uk

Proteins employ a wide variety of folds to perform their biological functions. How are these folds first acquired? An important step toward answering this is to obtain an estimate of the overall prevalence of sequences adopting functional folds.

[...]Starting with a weakly functional sequence carrying this signature, clusters of ten side-chains within the fold are replaced randomly, within the boundaries of the signature, and tested for function. The prevalence of low-level function in four such experiments indicates that roughly one in 10(64) signature-consistent sequences forms a working domain. Combined with the estimated prevalence of plausible hydropathic patterns (for any fold) and of relevant folds for particular functions, this implies the overall prevalence of sequences performing a specific function by any domain-sized fold may be as low as 1 in 10(77), adding to the body of evidence that functional folds require highly extraordinary sequences.

So atheists are in double jeopardy here. They don’t have a way to build the Scrabble letters needed for life, and they don’t have a way to form the Scrabble letters into meaningful words and sentences. Point out that the more research we do, the tougher the problem gets to solve for naturalists, and the more it looks like an effect of intelligence. Write out the calculations for them.

4) The best candidate to explain the sudden origin of the Cambrian era fossils was the Ediacaran fauna, but those are now recognized as not being precursors to the Cambrian fossils.

Science Daily reports on a paper from the peer-reviewed journal Science:

Evidence of the single-celled ancestors of animals, dating from the interval in Earth’s history just before multicellular animals appeared, has been discovered in 570 million-year-old rocks from South China by researchers from the University of Bristol, the Swedish Museum of Natural History, the Paul Scherrer Institut and the Chinese Academy of Geological Sciences.

[...]This X-ray microscopy revealed that the fossils had features that multicellular embryos do not, and this led the researchers to the conclusion that the fossils were neither animals nor embryos but rather the reproductive spore bodies of single-celled ancestors of animals.

Professor Philip Donoghue said: “We were very surprised by our results — we’ve been convinced for so long that these fossils represented the embryos of the earliest animals — much of what has been written about the fossils for the last ten years is flat wrong. Our colleagues are not going to like the result.”

Professor Stefan Bengtson said: “These fossils force us to rethink our ideas of how animals learned to make large bodies out of cells.”

The trend is that there is no evolutionary explanation for the body plans that emerged in the Cambrian era. If you want to make the claim that “evolution did it”, then you have to produce the data today. Not speculations about the future. The data we have today says no to naturalism. The only way to affirm naturalistic explanations for the evidence we have is by faith. But rational people know that we need to minimize our leaps of faith, and go with the simplest and most reasonable explanation – an intelligence is the best explanation responsible for rapid generation of biological information.

Conclusion

I do think it’s important for Christians to focus more on scientific apologetics and to focus their academic careers in scientific fields. So often I look at Christian blogs, and I see way too much G. K. Chesterton, Francis Chan and other untestable, ineffective jibber-jabber. We need to bring the hard science, and stop making excuses about not being able to understand it because it’s too hard. It’s not too hard. Everyone can understand “Who Made God?” by Edgar Andrews – start with that! Then get Lee Strobel’s “The Case for a Creator“. That’s more than enough for the average Christian on science apologetics. We all have to do our best to learn what works. You don’t want to be anti-science and pro-speculation like atheists are. I recommend reading Uncommon Descent and Evolution News every day for a start.

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New study: sub-optimal / poor design of the eye / retina isn’t really

I think this “sub-optimal” argument against a Designer is stupid, because designs are always trade-offs between different quality goals, but just to put this one to bed, here is Evolution News.

Excerpt:

Now a new paper in Nature Communications, “Müller cells separate between wavelengths to improve day vision with minimal effect upon night vision,” has expanded upon this research, further showing the eye’s optimal design. According to the paper, Müller cells not only act as optical fibers to direct incoming light through the optic nerve, but are fine-tuned to specific wavelengths to ensure that light reaches the proper retinal cells. From the Abstract:

Vision starts with the absorption of light by the retinal photoreceptors — cones and rods. However, due to the ‘inverted’ structure of the retina, the incident light must propagate through reflecting and scattering cellular layers before reaching the photoreceptors. It has been recently suggested that Müller cells function as optical fibres in the retina, transferring light illuminating the retinal surface onto the cone photoreceptors. Here we show that Müller cells are wavelength-dependent wave-guides, concentrating the green-red part of the visible spectrum onto cones and allowing the blue-purple part to leak onto nearby rods. This phenomenon is observed in the isolated retina and explained by a computational model, for the guinea pig and the human parafoveal retina. Therefore, light propagation by Müller cells through the retina can be considered as an integral part of the first step in the visual process, increasing photon absorption by cones while minimally affecting rod-mediated vision.

(Amichai M. Labin, Shadi K. Safuri, Erez N. Ribak, and Ido Perlman, “Müller cells separate between wavelengths to improve day vision with minimal effect upon night vision,” Nature Communications, DOI: 10.1038/ncomms5319 (July 8, 2014).)

The paper presents Müller cells as a direct answer to the view that the vertebrate eye has a suboptimal wiring:

[T]he mammalian retina and the peripheral retina of humans and primates are organized in a seemingly reverse order with respect to the light path. This arrangement places the photoreceptors, responsible for light absorption, as the last cells in the path of light, rather than the first. Therefore, the incident light must propagate through five reflecting and scattering layers of cell bodies and neural processes before reaching the photoreceptors. This ‘inverted’ retinal structure is expected to cause blurring of the image and reduction in the photon flux reaching the photoreceptors, thus reducing their sensitivity. It has been recently reported that retinal Müller cells act as light guides serving to transfer light across the retina, from the vitreo-retinal border towards the photoreceptors.

Bookmark it because this is the kind of silly objection to design that they hear on the Discovery Channel, PBS, etc.

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Did your science textbook teach that peppered moths prove evolution?

Here’s a post by Jonathan Wells at Evolution News, which re-caps the history of the peppered moths experiment.

Excerpt: (links removed)

The peppered moth story is familiar — even overly familiar — to most readers of ENV, so I will summarize it only briefly here. Before the industrial revolution, most peppered moths in England were light-colored; but after tree trunks around cities were darkened by pollution, a dark-colored (“melanic”) variety became much more common (a phenomenon known as “industrial melanism”). In the 1950s, British physician Bernard Kettlewell performed some experiments that seemed to show that the proportion of melanic moths had increased because they were better camouflaged on darkened tree trunks and thus less likely to be eaten by predatory birds.

Kettlewell’s evidence soon became the classic textbook demonstration of natural selection in action — commonly illustrated with photos of peppered moths resting on light- and dark-colored tree trunks.

By the 1990s, however, biologists had discovered several discrepancies in the classic story– not the least of which was that peppered moths in the wild do not usually rest on tree trunks. Most of the textbook photos had been staged.

In the 2000s the story began disappearing from the textbooks. British biologist Michael Majerus then did some studies that he felt supported the camouflage-predation explanation. But before he died of cancer in 2009, he only managed to publish a report of his study in the Darwin lobby’s in-house magazine Evolution: Education and Outreach. Now four other British biologists have presented his results posthumously in the Royal Society’s peer-reviewed Biology Letters. In an accompanying supplement, the authors presented their version of what they call “the peppered moth debacle.” And a debacle it certainly is, but not in the way they think.

According to Charles Darwin, natural selection has been “the most important” factor in the descent with modification of all living things from one or a few common ancestors, yet he had no actual evidence for it. All he could offer in The Origin of Species were “one or two imaginary illustrations.” It wasn’t until almost a century later that Kettlewell seemed to provide “Darwin’s missing evidence” by marking and releasing light- and dark-colored moths in polluted and unpolluted woodlands and recovering some of them the next day. Consistent with the camouflage-predation explanation, the proportion of better-camouflaged moths increased between their release and recapture.

Throughout the 1970s and 1980s, however, researchers reported various problems with the camouflage-predation explanation, and in 1998 University of Massachusetts biologist Theodore Sargent and two colleagues published an article in volume 30 of Evolutionary Biology concluding “there is little persuasive evidence, in the form of rigorous and replicated observations and experiments, to support this explanation at the present time.” (p. 318)

The same year, Michael Majerus published a book in which he concluded that evidence gathered in the forty years since Kettlewell’s work showed that “the basic peppered moth story is wrong, inaccurate, or incomplete, with respect to most of the story’s component parts.” (p. 116) In a review of Majerus’s book published in Nature, University of Chicago evolutionary biologist Jerry Coyne wrote: “From time to time, evolutionists re-examine a classic experimental study and find, to their horror, that it is flawed or downright wrong.” According to Coyne, the fact that peppered moths in the wild rarely rest on tree trunks “alone invalidates Kettlewell’s release-and-recapture experiments, as moths were released by placing them directly onto tree trunks.”

In 1999, I published an article in The Scientist summarizing these and other criticisms of the peppered moth story, and in 2000 I included a chapter on peppered moths in my book Icons of Evolution. Then, in 2002, journalist Judith Hooper published a book about the controversy titled Of Moths and Men. Hooper accused Kettlewell of fraud, though I never did; my criticism was directed primarily at textbook writers who ignored problems with the story and continued to use staged photos even after they were known to misrepresent natural conditions.

Jonathan has actually written about a number of  misleading things that you may mind in Biology textbooks.

Here are the sections in his book “Icons of Evolution“:

  • The Miller-Urey Experiment
  • Darwin’s Tree of Life
  • Homology in Vertebrate Limbs
  • Haeckel’s Embroys
  • Archaeopteryx–The Missing Link
  • Peppered Moths
  • Darwin’s Finches
  • Four-Winged Fruit Flies
  • Fossil Horses and Directed Evolution
  • From Ape to Human: The Ultimate Icon

Dr. Wells holds a Ph.D in Molecular and Cell Biology from the University of California at Berkeley.

Filed under: Commentary, , , , , , , , ,

Four ways that the progress of science conflicts with naturalistic speculations

When people ask me whether the progress of science is more compatible with theism or atheism, I offer the following four basic pieces of scientific evidence that are more compatible with theism than atheism.

Here are the four pieces of evidence best explained by a Creator/Designer:

  1. the kalam argument from the origin of the universe
  2. the cosmic fine-tuning (habitability) argument
  3. the biological information in the first replicator (origin of life)
  4. the sudden origin of all of the different body plans in the fossil record (Cambrian explosion)

And I point to specific examples of recent discoveries that confirm those four arguments. Here are just a few of them:

  1. An explanation of 3 of the 6 experimental evidences for the Big Bang cosmology (From an article from Caltech)
  2. Examples of cosmic fine-tuning to allow the existence of conscious, embodied life (From the New Scientist)
  3. Evidence that functional protein sequences are beyond the reach of chance, (from Doug Axe’s JMB article)
  4. Evidence showing that Ediacaran fauna are not precursors to the Cambrian fossils, (from the journal Nature)

Atheists will typically reply to the recent scientific discoveries that overturned their speculations like this:

  1. Maybe the Big Bang cosmology will be overturned by the Big Crunch/Bounce so that the universe is eternal and has no cause
  2. Maybe there is a multiverse: an infinite number of unobservable, untestable universes which makes our finely-tuned one more probable
  3. Maybe the origin of life could be the result of chance and natural processes
  4. Maybe we will find a seamless chain of fossils that explain how the Cambrian explosion occurred slowly, over a long period time

Ever heard any of these responses?

Below I list some resources to help you to respond to the four responses of atheists to the experimental data.

1) The Big Crunch/Bounce has been disproved theoretically and experimentally.

Theoretically:

Nature 302, 505 – 506 (07 April 1983); doi:10.1038/302505a0

The impossibility of a bouncing universe

ALAN H. GUTH* & MARC SHER†

*Center for Theoretical Physics, Laboratory for Nuclear Science and Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA

†Department of Physics, University of California, Irvine, California 92717, USA

Petrosian1 has recently discussed the possibility that the restoration of symmetry at grand unification in a closed contracting Robertson–Walker universe could slow down and halt the contraction, causing the universe to bounce. He then went on to discuss the possibility that our universe has undergone a series of such bounces. We disagree with this analysis. One of us (M.S.) has already shown2 that if a contracting universe is dominated by radiation, then a bounce is impossible. We will show here two further results: (1) entropy considerations imply that the quantity S (defined in ref. 1 and below), which must decrease by ~1075 to allow the present Universe to bounce, can in fact decrease by no more than a factor of ~2; (2) if the true vacuum state has zero energy density, then a universe which is contracting in its low temperature phase can never complete a phase transition soon enough to cause a bounce.

Experimentally:

The universe is not only expanding, but that expansion appears to be speeding up. And as if that discovery alone weren’t strange enough, it implies that most of the energy in the cosmos is contained in empty space — a concept that Albert Einstein considered but discarded as his “biggest blunder.” The new findings have been recognized as 1998’s top scientific breakthrough by Science magazine.

[...]The flood of findings about the universe’s expansion rate is the result of about 10 years of study, said Saul Perlmutter, team leader of the Supernova Cosmology Project at Lawrence Berkeley National Laboratory.

Perlmutter and others found such a yardstick in a particular kind of exploding star known as a Type 1A supernova. Over the course of several years, the astronomers developed a model to predict how bright such a supernova would appear at any given distance. Astronomers recorded dozens of Type 1A supernovae and anxiously matched them up with redshifts to find out how much the universe’s expansion was slowing down.

To their surprise, the redshift readings indicated that the expansion rate for distant supernovae was lower than the expansion rate for closer supernovae, Perlmutter said. On the largest scale imaginable, the universe’s galaxies appear to be flying away from each other faster and faster as time goes on.

“What we have found is that there is a ‘dark force’ that permeates the universe and that has overcome the force of gravity,” said Nicholas Suntzeff of the Cerro Tololo Inter-American Observatory, who is the co-founder of another group called the High-z Supernova Search Team. “This result is so strange and unexpected that it perhaps is only believable because two independent international groups have found the same effect in their data.”

There has only been one creation of the universe, and the universe will never reverse its expansion, so that it could oscillate eternally. That view is popular, perhaps in part because many people watched videos of Carl Sagan speculating about it in public school classrooms, but all it was was idle naturalistic speculation, (Sagan was a naturalist, and held out hope that science would vindicate naturalism), and has been contradicted by good experimental science. You should be familiar with the 3 evidences for the Big Bang (redshift, light element abundances (helium/hydrogen) and the cosmic microwave background radiation. There are others, (radioactive element abundances, second law of thermodynamics, stellar lifecycle), but those are the big three. Point out how the experimental evidence for the Big Bang has piled up, making the problem even worse for the eternal-universe naturalists.

2) The multiverse has not been tested experimentally, it’s pure speculation.

Speculation:

Multiverse thinking or the belief in the existence of parallel universes is more philosophy or science fiction than science. ”Cosmology must seem odd to scientists in other fields”.

George Ellis, a well-known mathematician and cosmologist, who for instance has written a book with Stephen Hawking, is sceptical of the idea that our universe is just another universe among many others.

A few weeks ago, Ellis, professor emeritus of applied mathematics at the University of Cape Town, reviewed Brian Greene’s book The Hidden Reality: Parallel Universes and the Deep Laws of the Cosmos (Knopf/Allen Lane, 2011) in the journal Nature. He is not at all convinced that the multiverse hypothesis is credible: ”Greene is not presenting aspects of a known reality; he is telling of unproven theoretical possibilities.”

According to professor Ellis, there is no evidence of multiverses, they cannot be tested and they are not science.

Ellis is not the only multiverse sceptic in this universe. A few months ago, science writer John Horgan wrote a column in Scientific American, expressing his doubt in multiverses.

When you get into a debate, you must never ever let the other side get away with asserting something they have no evidence for. Call them on it – point out that they have no evidence, and then hammer them with evidence for your point. Pile up cases of fine-tuning on top of each other and continuously point out that they have no experimental evidence for their speculations. Point out that more evidence we get, the more cases of fine-tuning we find, and the tougher the problem gets for naturalists. There is no evidence for a multiverse, but there is evidence for fine-tuning. TONS OF IT.

3) Naturalistic theories for the origin of life have two problems: can’t make the amino acids in an oxydized atmosphere and can’t make protein and DNA sequences by chance in the time available.

Building blocks:

The oxidation state of Hadean magmas and implications for early Earth’s atmosphere

Dustin Trail, E. Bruce Watson & Nicholas D. Tailby

Nature 480, 79–82 (01 December 2011) doi:10.1038/nature10655

[...]These results suggest that outgassing of Earth’s interior later than ~200?Myr into the history of Solar System formation would not have resulted in a reducing atmosphere.

Functional protein sequences:

J Mol Biol. 2004 Aug 27;341(5):1295-315.

Estimating the prevalence of protein sequences adopting functional enzyme folds.

Axe DD.

The Babraham Institute, Structural Biology Unit, Babraham Research Campus, Cambridge CB2 4AT, UK. doug.axe@bbsrc.ac.uk

Proteins employ a wide variety of folds to perform their biological functions. How are these folds first acquired? An important step toward answering this is to obtain an estimate of the overall prevalence of sequences adopting functional folds.

[...]Starting with a weakly functional sequence carrying this signature, clusters of ten side-chains within the fold are replaced randomly, within the boundaries of the signature, and tested for function. The prevalence of low-level function in four such experiments indicates that roughly one in 10(64) signature-consistent sequences forms a working domain. Combined with the estimated prevalence of plausible hydropathic patterns (for any fold) and of relevant folds for particular functions, this implies the overall prevalence of sequences performing a specific function by any domain-sized fold may be as low as 1 in 10(77), adding to the body of evidence that functional folds require highly extraordinary sequences.

So atheists are in double jeopardy here. They don’t have a way to build the Scrabble letters needed for life, and they don’t have a way to form the Scrabble letters into meaningful words and sentences. Point out that the more research we do, the tougher the problem gets to solve for naturalists, and the more it looks like an effect of intelligence. Write out the calculations for them.

4) The best candidate to explain the sudden origin of the Cambrian era fossils was the Ediacaran fauna, but those are now recognized as not being precursors to the Cambrian fossils.

Science Daily reports on a paper from the peer-reviewed journal Science:

Evidence of the single-celled ancestors of animals, dating from the interval in Earth’s history just before multicellular animals appeared, has been discovered in 570 million-year-old rocks from South China by researchers from the University of Bristol, the Swedish Museum of Natural History, the Paul Scherrer Institut and the Chinese Academy of Geological Sciences.

[...]This X-ray microscopy revealed that the fossils had features that multicellular embryos do not, and this led the researchers to the conclusion that the fossils were neither animals nor embryos but rather the reproductive spore bodies of single-celled ancestors of animals.

Professor Philip Donoghue said: “We were very surprised by our results — we’ve been convinced for so long that these fossils represented the embryos of the earliest animals — much of what has been written about the fossils for the last ten years is flat wrong. Our colleagues are not going to like the result.”

Professor Stefan Bengtson said: “These fossils force us to rethink our ideas of how animals learned to make large bodies out of cells.”

The trend is that there is no evolutionary explanation for the body plans that emerged in the Cambrian era. If you want to make the claim that “evolution did it”, then you have to produce the data today. Not speculations about the future. The data we have today says no to naturalism. The only way to affirm naturalistic explanations for the evidence we have is by faith. But rational people know that we need to minimize our leaps of faith, and go with the simplest and most reasonable explanation – an intelligence is the best explanation responsible for rapid generation of biological information.

Conclusion

I do think it’s important for Christians to focus more on scientific apologetics and to focus their academic careers in scientific fields. So often I look at Christian blogs, and I see way too much G. K. Chesterton, Francis Chan and other untestable, ineffective jibber-jabber. We need to bring the hard science, and stop making excuses about not being able to understand it because it’s too hard. It’s not too hard. Everyone can understand “Who Made God?” by Edgar Andrews – start with that! Then get Lee Strobel’s “The Case for a Creator“. That’s more than enough for the average Christian on science apologetics. We all have to do our best to learn what works. You don’t want to be anti-science and pro-speculation like atheists are. I recommend reading Uncommon Descent and Evolution News every day for a start.

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