Wintery Knight

…integrating Christian faith and knowledge in the public square

Stephen C. Meyer and Peter Atkins debate intelligent design

This dialog occurred in 2010 on the Unbelievable radio show.

I made a rough transcript, so please see below for that.

The MP3 file is here. (60 minutes)

Details:

The documentary film “Expelled” is presented by US Actor Ben Stein and makes the case that scientists who question Darwinian orthodoxy and support Intelligent Design are being “expelled” from academia.

As the UK edition of the DVD is released we ask “Is freedom of thought at stake or is Intelligent Design out of bounds when it comes to biological science?”

Stephen C Meyer is co founder of the Discovery Institute in the USA and a major proponent of Intelligent Design.

Peter Atkins is Professor of Chemistry at Oxford University and an outspoken atheist.

They both feature in “Expelled” and join Justin to debate the pros and cons of Intelligent Design theory.

Mark Haville who is bringing the film to the UK also joins the discussion.

Note: The transcript below is quite snarky and may include paraphrases of Dr. Atkins for the sake of humor.

My rough transcript of the Meyer-Atkins debate

Stephen Meyer:
– started researching on ID while doing his PhD at Cambridge
– the question is whether the information-bearing properties in DNA require a designer
– what cause is adequate to explain the digital code that in the simplest living cell
– alternative explanations like self-organization and RNA-first have failed
– so the best explanation for functional sequences of parts is an intelligent designer
– Darwinists have responded to this argument with insults and suppression of dissent

Peter Atkins:
– intelligent design is creationism
– there is no science at all in it
– information can emerge without an intelligent designer
– structures emerge spontaneously, no agent is needed to generate the structure
– information in DNA is also a structure

Stephen Meyer:
– structure and information are two different things
– many structures emerge spontaneously
– structure may be like the vortex that occurs when water goes down a drain

Peter Atkins:
– the vortex is information

Stephen Meyer:
– structures are different from functionally-specified digital information
– in DNA, there is a 4-digit alphabet that is used to create code sequences
– the thing to be explained is where do the functional sequences come from

Peter Atkins:
– information can grow without an agent
– the second law of thermodynamics
– the universe is falling into disorder
– but there are local abatements of chaos that create information
– evolution can cause the amount of information to grow

Stephen Meyer:
– that’s just an assertion
– I agree that energy flow through a system can produce spontaneous order
– but spontaneous order is not the same thing as information

Peter Atkins:
– spontaneous order is the same as information

Stephen Meyer:
– it’s not order that needs to be explained it’s specified complexity

Peter Atkins:
– what do you mean by specified complexity?

Stephen Meyer:
– the chemical bonds that connect to each letter do not determine the letter
– the chemical bonding sites will accept any letter as easily as any other
– any one of the 4 bases (letters) can attach at any place along the backbone

Peter Atkins:
– the selection of which letter comes next is determined by evolution

Stephen Meyer:
– that is just an assertion
– there is no physical process that sequences the letters to have a function

Peter Atkins:
– do you believe in evolution? YES OR NO!

Mark Haville:
– for him to answer the question you have to define the word
– do you mean macro or micro? biological or stellar? directed or undirected?

Peter Atkins:
– undirected molecules to man evolution by natural processes

Stephen Meyer:
– but even Dawkins doesn’t believe in evolution then
– you’re including the origin of life from non-living matter in evolution
– Dawkins says that there is no known naturalistic explanation for that

Mark Haville:
– you need to define your terms

[They discuss of the movie Expelled and the case of Richard Sternberg]

Stephen Meyer:
– the problem is people don’t want to talk about the science
– they denounce dissent as unscientific
– they will not debate about whther natural causes can explain the information
– I want to talk about the science

Peter Atkins:
– ID people raise interesting questions for naturalists to work on
– but you want to tell us what the answer is (intelligence) before we begin
– you start from the idea that an intelligence was involved

Justin Brierley:
– but you start with the idea that natural mechanisms can explain everything!

Stephen Meyer:
– for Dr. Atkins, only explanations based on material processes are valid

Peter Atkins:
– that is correct

Stephen Meyer:
– but we think that the activities of mind can explain some effects
– e.g. – the best explanation of the Rosetta stone is a mind

Peter Atkins:
– but we naturalists think of minds as material as well

Stephen Meyer:
– that’s a materialist pre-supposition on your part
– we would have to have a debate about mind and body

Mark Haville:
– I think that the materialist position is socially dangerous
– the problem with naturalism is that it is an ideology
– the ideology pushes absurdities, e.g. – the universe came from nothing uncaused
– and naturalists exert power over others to force them to believe nonsense

Stephen Meyer:
– science progresses as the result of scientists disagreeing
– both sides agree to the facts
– the debate is about the interpretation of those facts
– and one side is being ruled out a priori based on the pre-supposition of materialism

Peter Atkins:
– why do you say that an intelligence is involved in DNA but not general relativity

Stephen Meyer:
– it is always logically possible that intelligence can be invlved in any effect
– the main thing is that explanations based on intelligence should not be ruled out

Peter Atkins:
= well you can’t appeal to any non-material process in expaining anything
– those are the rules

Moderator:
– what does intelligent design have to do with religion?

Stephen Meyer:
– creationism is about understanding the istory of life using the Bible
– intelligent design is about using the same method of inquiry as Darwin
– we know that information arises from intelligent causes
– humans create information all the time by using intelligence to sequence parts

Moderator:
– are intelligent design proponents disreputable?

Stephen Meyer:
– what’s disreputable is shutting down debate by setting arbitrary rules

Peter Atkins:
– we are both interested in the same questions

Moderator:
– why won’t you let Stephen publish his papers then?

Peter Atkins:
– because it breaks the pre-suppositions of naturalism and materialism

Stephen Meyer:
– you’re shutting down inquiry by using an arbitrary definition of science

Mark Haville:
– we need to define the word science
– science should be based on what we can observe empirically
– we can observe micro-evolution empirically
– but Darwinism goes beyond what is observable to postulate macro-evolution

Peter Atkins:
– but paleobiology is replete with evidence

Stephen Meyer:
– paleobiology uses a method of inference that I think is valid
– but intelligent design uses the same mode of reasoning which is also valid

Peter Atkins:
= you’re intellectually lazy
– we’re smart, we’re using our brains

Moderator:
– you’re saying that appeals to intelligent causes ends science?
– is ID the view that some things are too complex to be explained with naturalism?

Peter Atkins:
– yes, and to teach children that materialism is false is child abuse

Stephen Meyer:
– let’s drop the insults and the rhetoric and focus on the arguments
– the ID argument is not based on what we don’t know, it’s based on what we DO know
– first, we can ask what undirected natural processes can and cannot do
– second, we can ask what we know about intelligent causes from our own experience
– what we do know seems to me to require an intelligent agent as a cause

Peter Atkins:
– GOD! Do you mean God!? Do you mean God!?

Stephen Meyer:
– I personally mean God, but all that the arguments proves is a generic intelligent cause
– and I am using the same method of investigation that Darwin used to get there
– what we know from our experience is that a mind is needed to create information

Peter Atkins:
– NONSENSE! ABSOLUTE NONSENSE!

Stephen Meyer:
– in my book, I list 10 predictions made by ID, so it’s not a science-stopper
– furthermore, the enterprise of science began with th goal of understanding God
– consider the earliest scientists, people like James Boyler and Johannes Kepler

Peter Atkins:
– that was 300 years ago, we’ve moved on

Mark Haville:
– what about Max Planck then?

Stephen Meyer:
– how about James Clark Maxwell?

Mark Haville:
– we need to focus on the facts

Peter Atkins:
– what do you mean by the facts?

Mark Haville:
– well the fact is that Darwinism has no mechanism to produce new information

Peter Atkins:
– well copying errors introduces beneficial mutations

Stephen Meyer:
– let’s focus on where we get the first information from the simplest organism
– you can’t account for the first organism by appealing to copying errors
– to add functionality to a program, you need new lines codes from an intelligence
– once you have life, you can generate some new information
– but you can’t generate macro-evolution either

Peter Atkins:
– if we give you your explanation for teh origin of life, will you give this up

Stephen Meyer:
– of course! I’m a former theistic evolutionist
– but right now the evidence is not there for it
– we have to decide these questions based on what we see with our own eyes today

Peter Atkins:
– but I pre-suppose materialism as the starting point of all explanations
– you’re just intellectually lazy to abandon my pre-supposition

Stephen Meyer:
– why is it is less intellectually lazy to insist that materialism is true
– we are making plenty of predictions, and isn’t that what science is about?
– consider Junk DNA – you guys said it had no use
– now we know it has a use

Peter Atkins:
– naturalists were open to the idea that junk DNA might have a use before ID

Moderator:
– Dr. Meyer, what about the wall that locks out intelligence as an explanation?

Stephen Meyer:
– if these are interesting questions, then we should allow freedom of inquiry
– that’s how science advances

Peter Atkins:
– for all their science-talk really they are just saying God did it
– people who don’t agree with me are not using their brains, like I do
– to give up on my pre-supposition of materialism is a denial of humanity

Mark Haville:
– there are important issues that are affected by our view of origins
– everyone who hasn’t seen Expelled movie should definitely see it

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Stephen C. Meyer lectures on intelligent design and the origin of life

A MUST-SEE lecture based on Dr. Stephen C. Meyer’s book “Signature in the Cell“.

You can get an MP3 of the lecture here. (30 MB)

I highly recommend watching the lecture, and looking at the slides. The quality of the video and the content is first class. There is some Q&A (9 minutes) at the end of the lecture.

Topics:

  • intelligent design is concerned with measuring the information-creating capabilities of natural forces like mutation and selection
  • Darwinists think that random mutations and natural selection can explain the origin and diversification of living systems
  • Darwinian mechanisms are capable of explaining small-scale adaptive changes within types of organisms
  • but there is skepticism, even among naturalists, that Darwinian mechanisms can explain the origin of animal designs
  • even if you concede that Darwinism can account for all of the basic animal body plans, there is still the problem of life’s origin
  • can Darwinian mechanisms explain the origin of the first life? Is there a good naturalistic hypothesis to explain it?
  • there are at least two places in the history of life where new information is needed: origin of life, and Cambrian explosion
  • overview of the structure of DNA and protein synthesis (he has helpful pictures and he uses the snap lock blocks, too)
  • the DNA molecule is composed of a sequence of proteins, and the sequence is carefully selected to have biological function
  • meaningful sequences of things like computer code, English sentences, etc. require an adequate cause
  • it is very hard to arrive at a meaningful sequence of a non-trivial length by randomly picking symbols/letters
  • although any random sequence of letters is improbable, the vast majority of sequences are gibberish/non-compiling code
  • similarly, most random sequences of amino acids are lab-proven (Doug Axe’s work) to be non-functional gibberish
  • the research showing this was conducted at Cambridge University and published in the Journal of Molecular Biology
  • so, random mutation cannot explain the origin of the first living cell
  • however, even natural selection coupled with random mutation cannot explain the first living cell
  • there must already be replication in order for mutation and selection to work, so they can’t explain the first replicator
  • but the origin of life is the origin of the first replicator – there is no replication prior to the first replicator
  • the information in the first replicator cannot be explained by law, such as by chemical bonding affinities
  • the amino acids are attached like magnetic letters on a refrigerator
  • the magnetic force sticks the letters ON the fridge, but they don’t determine the specific sequence of the letters
  • if laws did determine the sequence of letters, then the sequences would be repetitive
  • the three materialist explanations – chance alone, chance and law, law alone – are not adequate to explain the effect
  • the best explanation is that an intelligent cause is responsible for the biological explanation in the first replicator
  • we know that intelligent causes can produce functional sequences of information, e.g. – English, Java code
  • the structure and design of DNA matches up nicely with the design patterns used by software engineers (like WK!)

There are some very good tips in this lecture so that you will be able to explain intelligent design to others in simple ways, using everyday household items and children’s toys to symbolize the amino acids, proteins, sugar phosphate backbones, etc.

Proteins are constructed from a sequence of amino acids:

A sequence of amino acids forming a protein

A sequence of amino acids forming a protein

Proteins sticking onto the double helix structure of DNA:

Some proteins sticking onto the sugar phosphate backbone

Some proteins sticking onto the sugar phosphate backbone

I highly, highly recommend this lecture. You will be delighted and you will learn something.

Here is an article that gives a general overview of how intelligent design challenges. If you want to read something more detailed about the material that he is covering in the lecture above related to the origin of life, there is a pretty good article here.

UPDATE: There is a good breakdown of some of the slides with helpful flow charts here on Uncommon Descent.

Positive arguments for Christian theism

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John Lennox and Paul Davies discuss aliens and the origin of life

An amazing debate about the origin of life and the cosmic fine-tuning between a Christian and a materialist agnostic. John Lennox is AWESOME in this debate, and he only talks for a tiny part of the debate. He’s very gracious, and focused the discussion on the areas that we care about. Paul Davies is an EXCELLENT scientist and well aware of what Christians believe. This is a great debate, very easy to listen to. Justin, the moderator, does a great job controlling a fantastic discussion.

The MP3 file is here.

Details

What does it take for life to get going in our universe? Is there intelligence in the stars or right under our nose? Renowned astrophysicist Paul Davies chats to Oxford Professor of Mathematics John Lennox.

A popular science author, Davies is also the Chair of the SETI post detection task force. His latest book “The Eerie Silence” which marks SETI’s 50th anniversary examines the likelihood of the universe producing life elsewhere.

John Lennox is a Christian Mathematician and philosopher. He is the author of “God’s Undertaker: has science buried God?” and has debated Richard Dawkins on several occasions.

Davies’ work on the fine tuning of the universe for life has been sympathetic to theism. In this programme Lennox challenges Davies to look to design not just in cosmology but in the cell. They also chat about what the discovery of ET would mean for Christian theology.

Summary

Justin:

  • Is there meaning in the universe?

Paul:

  • We have no evidence for or against intelligent life elsewhere in the universe
  • The vastness of the universe makes me think there is life elsewhere
  • Humans are capable of observing and understanding the universe
  • It seems the universe has the ability to create observers to understand it
  • If one species has this ability, then we should expect others to do it

John:

  • The fact that we can observe the universe and do science has cosmic significance
  • Our rare habitable planet and our ability to do science is suggestive of purpose
  • So science itself points to an extra-terrestrial intelligence: GOD
  • The complexity of life and consciousness itself points away from atheism
  • Monotheism gave birth to science
  • Human minds capable of doing science are not compatible with atheistic materialism

Justin:

  • Why do you say that either we are the only life or there are many different kinds of life?

Paul:

  • There are lots of factors that have to be met to have a site for simple life
  • These are related to the fine-tuning of cosmic constants, e.g. gravitational force
  • But there are also factors that have to be met for originating intelligent life
  • Things like convergence, self-organization, etc.
  • So the cosmic requirements and evolutionary requirements are different
  • Darwinian evolution doesn’t solve the problem of the origin of life
  • 50 years ago, skepticism about alien life existing anywhere was excessive
  • Today, credulity about alien life exiting everywhere is excessive
  • The naturalist is searching for a process that creates life easily

John:

  • Paul agrees that there is no theory for a naturalistic origin of life
  • This is fatal for the idea that life can emerge elsewhere in the universe
  • We have not discovered any law that produces life without an intelligence
  • Consider the method used by SETI used to detect an alien intelligence
  • Why can’t this method be applied to the origin of life on Earth?
  • Why can’t an intelligence created specified complexity (functional information)?
  • Why can’t an intelligence created epigenetics and protein folding?

Paul:

  • Darwinian evolution can add new biological information after life begins

John:

  • Darwinian evolution assumes a mutating replicating life form to act on

Paul:

  • You can’t generate specified complexity by using physical laws
  • You can’t generate specified complexity by chance
  • At this point we are guessing as to how life might have formed

John:

  • Why do we have to rule out an intelligent cause a priori
  • If you can recognize an intelligence in outer space, why not in living systems?

Paul:

  • I don’t mind the word “intelligence”, it’s the word “signal”
  • I oppose the idea that God or aliens manipulated physical stuff to create life
  • It’s an “ugly explanation and very unappealing both theologically and scientifically”
  • I prefer the idea that the universe has processes to self-organize and create complexity
  • When it comes to supernatural meddling by God, “I don’t want that”
  • If I were God, I would create the universe so that I would not have to intervene
  • I think God would be more clever if he did not have to intervene
  • My preferences about what is “clever” determines what scientific conclusions are allowed

John:

  • Humans already have experience with their non-material minds to move atoms (matter)
  • If God is a mind, then there is no reason why he cannot move atoms (matter)

Paul:

  • My mind is physical, so are you saying that God is physical?
  • If God intervenes in the universe, then what is he doing now?

John:

  • There is a distinction between acts of creation and providential upholding the universe
  • God is also speaking to people and drawing humans toward him
  • God is spirit, not material

Paul:

  • How can a non-physical entity cause effects on the physical world?

John:

  • What science reveals that there is information needed for the origin of life
  • Information requires an intelligence to create it, just as with human who write books
  • That’s not God of the gaps – it’s an inference based on what we know today

Paul:

  • We may be able to explain the origin of life later, using matter, law and chance
  • What you’re saying is that God tinkers with the genome
  • If you say that God intervened once, then he intervenes all the time, everywhere!
  • I don’t want a God who tinkers in the genome
  • if God could intervene in the universe that would remove its intelligibility

John:

  • Look at the cover of this book – when I read words, I infer an intelligence
  • There are bad gaps that the progress of science closes
  • There are good gaps that science opens, showing the need for intelligence
  • On the one hand, you say we have no theory of the origin of life
  • On the other hand, you know that an intelligent designer wasn’t involved
  • If we don’t know how life began, why do you rule God out a priori?

Paul:

  • What scientists want to do is to explain the universe without involving God
  • naturalists want to use science to discover only materialist explanations
  • The purpose of SETI is to prove that there is other life in the universe
  • This would then show that there is a naturalistic way of making life
  • I agree that information in living systems is real hard to explain materialistically
  • I believe in the power of emergence
  • We might discover laws that prove that complexity can emerge without intelligence
  • The discovery of alien life would help to show that no intelligence is needed to make life

Justin:

  • What sort of cosmic fine-tuning is needed at the Big Bang for life to occur?

Paul:

  • It’s true that the universe appears extremely fine-tuned for life to exist
  • The typical answer from naturalists is that there is a multiverse
  • But the multiverse “falls far short” of providing a good answer to the fine-tuning
  • It’s irrational to appeal to massive numbers of unseen universes to explain fine-tuning
  • The design and purpose seen in the universe may be due to God or it may be emergent

John:

  • The fine-tuning is real and the multiverse is a desperate attempt to evade the creator
  • Sir Martin Rees (an atheist) says he “prefers” the multiverse to a designer
  • Scientists are not supposed to prefer anything except what is true

Justin:

  • Would the discovery of aliens hurt Christianity, because of the belief in the uniqueness of humans?

Paul:

  • Christians believe that Jesus came to save HUMANS specifically, not animals or aliens
  • If we were to discover intelligent aliens, it would challenge traditional religions
  • What will God do with alien races? Multiple incarnations? Or just preach the gospel to them?

John:

  • We don’t know if the aliens exist, first of all – it’s speculative
  • The Bible teaches that humans bear the image of God
  • We just don’t know whether alien species are also made in God’s image

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Theistic evolutionists and the two-platoon strategy

What should we make of theistic evolutionists telling us that you can believe in God, while still knowing that matter, law and chance explain the full development of all of life?

Consider this quotation from Phillip E. Johnson.

Quote:

The National Academy’s way of dealing with the religious implications of evolution is akin to the two-platoon system in American football. When the leading figures of evolutionary science feel free to say what they really believe, writers such as Edward O. Wilson, Richard Dawkins, Daniel Dennett, Carl Sagan, Steven Pinker, Stephen Jay Gould, Richard Lewontin and others state the “God is dead” thesis aggressively, invoking the authority of science to silence any theistic protest. That is the offensive platoon, and the National Academy never raises any objection to its promoting this worldview.

At other times, however, the scientific elite has to protect the teaching of the “fact of evolution” from objections by religious conservatives who know what the offensive platoon is saying and who argue that the science educators are insinuating a worldview that goes far beyond the data. When the objectors are too numerous or influential to be ignored, the defensive platoon takes the field. That is when we read those spin-doctored reassurances saying that many scientists are religious (in some sense), that science does not claim to have proved that God does not exist (but merely that he does not affect the natural world), and that science and religion are separate realms which should never be mixed (unless it is the materialists who are doing the mixing). Once the defensive platoon has done its job it leaves the field, and the offensive platoon goes right back to telling the public that science has shown that “God” is permanently out of business. (The Wedge of Truth, IVP 2000, pp. 88-89).

So what naturalistic scientists believe is that God didn’t do anything to create the diversity of life – that nature does all of its own creating. In fact, it doesn’t matter if the best naturalistic explanation is improbable or implausible – scientists must bitterly cling to materialistic explanations of natural phenomena.

The problem for these scientists is that they are taxpayer-funded, and religious people don’t like paying to have scientists shoehorn reality into a pre-supposed naturalistic framework. Sometimes, religious people get annoyed about being told that sparking gases can create functional proteins. And sometimes, religious people get annoyed about being told that the universe oscillates eternally despite observations that falsify that speculative theory. And sometimes, religious people get annoyed about being told that there are as yet undiscovered fossilized precusors to the Cambrian era fossils.

Naturalists think that opposition to these lame naturalistic theories only ever be religiously-motivated. They cannot accept that people might question their naturalistic just-so stories on scientific grounds. So what do the naturalists do when faced with scientifically-motivated dissent that they think is religiously motivated? Well, they trot out “religious” scientists. These “religious” scientists claim to have a deep personal faith in God, and a belief in miracles. But these religious scientists believe that what actually happened is that law, matter and chance did all the creating of life. This is the “second platoon”. They are sent out to mislead the public by talking about their personal faith, and what God could and couldn’t do, and how evolutionists can believe in God without any evidence of intelligent causes in the history of life. The one question they most want to avoid is whether science, done in the ordinary naturalistic way, can discover evidence of intelligent agency in the history of the development of life.

Now, take a look at this article by Jay Richards. He cites some theistic evolutionists.

Excerpt:

Biologist Ken Miller:

For his part, [Ken] Miller, a biologist, has no qualms about telling us what God would do: “And in Catholicism, he said, God wouldn’t micromanage that way. ‘Surely he can set things up without having to violate his own laws.'”

I am unaware of any tenet of Catholic theology that requires God not to micromanage. It is, however, a tenet of deism.

Got that? What really happened is that God didn’t do anything. How does he know that? From the science? No. Because he assumes naturalism. Oh, it’s true that he says that God is lurking somewhere behind the material processes that created life. But God’s agency is undetectable by the methods of science. And he is hoping that you will accept his subjective pious God-talk as proof that a fundamentally atheistic reality is somehow reconcilable with a robust conception of theism.

More from Richards:

Then we get Stephen Barr offering his private definition of “chance.”

It is possible to believe simultaneously in a world that is shaped by chance and one following a divine plan. “God is in charge and there’s a lot of accident,” said Barr, also a Catholic. “It’s all part of a plan. . . . God may have known where every molecule was going to move.”

What does Barr really believe? He believes that what science shows is that nature created life without any interference by an intelligent agent. Barr then offers believers his subjective pious God-talk to reassure them that evolution is compatible with religion. He has a personal belief – NOT BASED ON SCIENCE – that the material processes that created all of life are “all part of a plan”. He cannot demonstrate that from science – it’s his faith commitment. And more speculations: “God may have known…”. He can’t demonstrate that God did know anything from science. He is just offering a personal opinion about what God “could have” done. The purpose of these subjective opinions is to appease those who ask questions about what natural mechanisms can really create. Can natural causes really account for the development of functional proteins? Never mind that – look at my shiny spiritual-sounding testimony!

That’s theistic evolution. What really happened is that no intelligent causes are needed to explain life. What they say is “God could” and “God might” and “I believe” and “I attend this church” and “I received a Christian award” and “I believe in miracles too”. None of these religious opinions and speculations are scientifically knowable – they are just opinions, speculations and biographical trivia. Atheists and theistic evolutions agree on what science shows about the diversity of life – intelligent causes didn’t do anything.

The quickest way to disarm a theistic evolutionist is to refuse to talk about religion or God, and to ask them to show you the naturalistic explanation of the Big Bang. And the naturalistic explanation of the fine-tuning. And the naturalistic explanation of the origin of life. And the naturalistic explanation of the Cambrian explosion. And so on. Focus on the science – don’t let them turn the conversation to their personal beliefs, or to the Bible, or to religion, or to philosophy. Ask them what they can show in the lab. If naturalistic mechanisms can do all the creating they say it can do, let’s see the demonstration in the lab.

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New study: fruit fly DNA reveals unexpected complexity

From Evolution News.

Excerpt:

You know about ENCODE, the project that found 80 percent or more of the human genome is transcribed and appears functional. Now, along comes modENCODE: the ENCODE project for model organisms. Results from the fruit fly are in, and Indiana University shares the surprises (for evolutionary theory, that is): “Study of complete RNA collection of fruit fly uncovers unprecedented complexity.”

The paper shows that the Drosophila genome is far more complex than previously suspected and suggests that the same will be true of the genomes of other higher organisms. The paper also reports a number of novel, particular results: that a small set of genes used in the nervous system are responsible for a disproportionate level of complexity; that long regulatory and so-called “antisense” RNAs are especially prominent during gonadal development; that “splicing factors” (proteins that control the maturation of RNAs by splicing) are themselves spliced in complex ways; and that theDrosophila transcriptome undergoes large and interesting changes in response to environmental stresses. (Emphasis added.)

Ten of the 41 researchers from 11 universities working on modENCODE came from IU. They found many genes transcribed only under stress, such as exposure to heat, cold, and toxins. “In total, 5,249 transcript models for 811 genes were revealed only under perturbed conditions,” they said. As if the “junk DNA” myth needed any more pounding, the lead author testifies:

“As usual in science, we’ve answered a number of questions and raised even more. For example, we identified 1,468 new genes, of which 536 were found to reside in previously uncharacterized gene-free zones.

The post on Evolution News also talks about another study from the University of Vienna on the genome of the sea anemone.  Their genome was way more complex than expected, too.

So what is the best explanation for all this specified complexity that enables biological function?

Evolution News explains:

Intelligent design… knows how to explain the observations. Whenever we see a complex, functioning system (like a rollout of a software system), we know intelligence played a role in its origin. We also know that intelligence can explain multiple, independent instantiations of similar systems. We never see, however, complex, networked systems arising de novo by unguided natural processes.

Yes. In the company I work for, we have a release of functional code every month (at least). These explanation for the increase in specified complexity in our applications is that busy little software engineers have been carefully sequencing characters into lines of Java code, for  purpose. No rational person believes that you can get huge increases in specified complexity by random chance. Code is code is code. It all requires a coder, just like the Big Bang requires a Big Bang. 

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